CDS

Accession Number TCMCG029C02549
gbkey CDS
Protein Id XP_023772507.1
Location join(238803..241430,241507..242205,242719..242769)
Gene LOC111921162
GeneID 111921162
Organism Lactuca sativa

Protein

Length 1125aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA432228
db_source XM_023916739.1
Definition sarcoplasmic reticulum histidine-rich calcium-binding protein-like [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category O
Description PHD-finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008623        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016590        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0031010        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070063        [VIEW IN EMBL-EBI]
GO:0070603        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1904949        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACAAGAGGAAATGGTGTTGGTGTCAAGGGAAATAAGCGGAGAAAGATTCAGCAAAGAGAACAGGACTCAGAGGAGTCAGATGAGGAATATAATGTGGCTGAAGATGAAGATAGTGATGAGTCAGATGAGTGCTATTCCTTAGATGGTGATGAATCAGAAGAGATATTAGCTGATTTTGGAAAGTCACGGAGGGTTGCTAGATCAAGAAACACCCGGAGGACTTCTGCAGGTAGGAAGGGGAATGAGATAGCAAAGCCTCGTAAGAGGAGAAGGGTTTCTTATACAGGTGATGATGATGATGATGATGATGAAGATGATGATGAAGAGTTTATGTCTTTGGGTAAGAAAGCTAAACGGATAAAGAAACCTAGGGAAAAGAAGAGGGTTTCATATACAGAAGTGGATGATGATGAAGAGTTTATGTCTTTAGGTAGGGAAGCTAAGCGGAGGGAAAAGAAGAGAGTTTCATATACAGAAGATGATGATGATGAAGACTTTGGAGAATTTATGTTTTCAAGTAGAAACCAGAGAAATAAGCCTCGGGAAAAGAAGAGGGTTTCTTATACAGAAGAAGAAGAAGAAGATGATGATGATGCAGGATTTATGTCTTCGGGTAGGGAAAGTAGCCGGATAAAGAAGCCTGTGGAAAAAAAGAGGTTTTCATATACAAAAGATGATGATGATGAGGAGGAGGAGGAGGATGATGATGACTATGCAGAATTTGTGTCTTTGGGTAGAAAGAGAAACCAGAGACAGAAACCTAAGGAAAAGAAGAGGGTTTCATATACAGAAGAGGATGAAGATGATGATGATGCAGAATTTATGTCATCAGGTAAGGAAGGTAAACATGTAAAGAAGCCTAGGGAAAAGAAGAAGGTTTCATATACAGAAGAGGATGATGATGTAGAGGACTATTTGGAATTCATGTCTTCAGGTAGAAAGAGAAGCCAGAGAAAGAAGTGTCACGAAGAGAAGAGGGTAGAGCATGAGGATAATGATGATGCAGAATTTATGTCTTTGGGTAAGGAATGTAACCAGGTAAACAACCCTAGGGAAAAGAAGAGGGTTTCATGTGCAGAAGAGGATGTTGGTGATGATGAGGACTATGCAGAATTCGAGTCCGAGGGTAGAAACCACATAAAGAATAGGGTTTCAGATACAGAAGAGGATGAGGATGATGCAGAATTTATGTCTTCAGGTAGGGAGGCTAACCATATAAAGAAGCCTAGGGAAAAGAATCGAGTTTCATATAGAGAAGAAGAAGAAGAAGAAGAGGACTATGCAGAATTTGTGTCTACGGGTAGAAATAGAACCCAAAGAAAAAAGCTTCAAAAGAGGATTTCGGATACAGAAGCAGATGATGATGATGATGATGGTGATGATGATGCAGAATTCATGTCTTTGGATAGTGAAGCTAACAAGATAACGAAGCCTATGGAATTGAAGAGGGTTTCATATACAGAAGGGGATGATGATGATGATGATGATCTTGGTAATGATGATGATGATGAAGAGTTTATATCTTTTGGTAGGGAAGGTAAACAGATAAAGAAGCCCAGGGAAAAGAATATGGTTGCATATAAAGAAGAGTATGATGATGATGAGGTTGATGATAAGGAAGATAACCAGATAAAGAACCTTAAGGAAAAGGAAAGTGTTTTATATACAAAAGAGGATGATGATAATGATGATGAGGGAGAGTATGCAGGATTTGTCTCTTTGGGTAGAAAGAAGCCTCAAGAAAAGGAGAGGGTTTCAGACACTGAAGATGATGATGATGATGATAGAGAGTTTATGTATCCAGGTGAGAAGGTAAACCAGAAAAAGAATCTTCGTGAGAAGAGGAAGGTTTCATACACAGAAGATGATTCTGACTTTATTTCCACAAGTAACAAGTCAAACCCAATAAATGCCCCTCAAGAAAAAAGTAGGATTTCATCTGAAGAAGACAATCAAGAAGAAGAAGATGAAAACGATGCAGAATTCAAGTTAAGTGAGAGTGATTTTCTTGATGATGAAGACGAAACACCAAAGATGAAAAAACCCGAGAAACCACCACAAAAAAAGAGTATCCGTGGAAGACATAAAAAGACGAAAAAGCCCACAAGGCCAAAACAAAGAAACCCCCGAAAGGTAGCTTCTACCAAAGACAAAAAGACGAAAAAACCCACACCAGAATCCGATTCAGATTTTGTGAGTCCTCCATCATCCGACCATGAATACACCATCTCAGAAGAAGAAAGAGAACAAATGAGAGAAGCAAGAGTATACTGTGCAAATCTAAGAGCTAAATTAAGAAGCTCCTCCTCCCAAAATCAAGAAGAAACCCAAAGAAAAAAATACCCAATAAGAAAAGGTAAAGAAAAGCTAGAAGAAAACACAAAAGACGAAATAGGAAAACAAGTTTGTGGAATCTGTTTATCAGAAGAAGCAAAAAGAACTGTCAGAGGTGTCCTAAATTGTTGTCGCCATTACTTCTGTTTCTCATGCATCATGGAATGGTCAAAAGTGGAATCCCGTTGCCCTTTATGTAAACAAAGATTTTCAACAATCACAAAAGCTGCAAAATCAGACACTGGATTTGACTCAAGAACAGTTGTCATCCCTGTTCCTGAATGCGACCAGGTATATGAGCCATCTGAAGAAGAGTTAAGGGGGTATCTTGACCCATACGAAAGTGTGATATGTACAGAGTGTCACCATGGTGGGGAAGACGCATTAATGTTGTTATGTGACATATGCGATTCATCTGCACATACTTTTTGTGTTGGTCTAGGAAGGGAGGTTCCGGAAGGAAATTGGTATTGTGACGGCTGTAGGCCGACTGTTTTCGGTTCCTTAAATTCATCAGATCCTTTACCACCATCTTCTTCCAGATCTCCCATTCCCGGAGGTTTCGATTTAAACGAATTATATGTTCCCGAAACGCCCCTCACACAACAACAACCTCAATCTCAACAAACACGTGTTTTGGTTTTACCTGAACCTGGTGATTTTACACCTGCTACTACTTTAAGAGATAGGAGGAGAATACATCGCCAAATACATCATCGGTTTTTGAATAATAACAGAATGAATGATTTAGTGAATCGAAATGGAGGAAGAACTTCTTCTTCTTCTGCTTCAGGGATTAGGTTATTTGGGTCTCAACTTGATCAACCTCAAAGTCAAAGGGACAATCATGTTGGTGTTGGTGCTGACGTGTCATTGGAAGGTGAACATGGTGGGCCCGGTTTGGGTTTGGGTTTTGATTCGAGATTGGGATTTGGACAGCTCCACCCTTGTACAAATAGATCCAGCATTGCTTCTGATGCATGCAGAGAGGTTGTGGGACCCTCGAGAACATCGCAAGGCGGTTTTCATGCACCATATTAA
Protein:  
MTRGNGVGVKGNKRRKIQQREQDSEESDEEYNVAEDEDSDESDECYSLDGDESEEILADFGKSRRVARSRNTRRTSAGRKGNEIAKPRKRRRVSYTGDDDDDDDEDDDEEFMSLGKKAKRIKKPREKKRVSYTEVDDDEEFMSLGREAKRREKKRVSYTEDDDDEDFGEFMFSSRNQRNKPREKKRVSYTEEEEEDDDDAGFMSSGRESSRIKKPVEKKRFSYTKDDDDEEEEEDDDDYAEFVSLGRKRNQRQKPKEKKRVSYTEEDEDDDDAEFMSSGKEGKHVKKPREKKKVSYTEEDDDVEDYLEFMSSGRKRSQRKKCHEEKRVEHEDNDDAEFMSLGKECNQVNNPREKKRVSCAEEDVGDDEDYAEFESEGRNHIKNRVSDTEEDEDDAEFMSSGREANHIKKPREKNRVSYREEEEEEEDYAEFVSTGRNRTQRKKLQKRISDTEADDDDDDGDDDAEFMSLDSEANKITKPMELKRVSYTEGDDDDDDDLGNDDDDEEFISFGREGKQIKKPREKNMVAYKEEYDDDEVDDKEDNQIKNLKEKESVLYTKEDDDNDDEGEYAGFVSLGRKKPQEKERVSDTEDDDDDDREFMYPGEKVNQKKNLREKRKVSYTEDDSDFISTSNKSNPINAPQEKSRISSEEDNQEEEDENDAEFKLSESDFLDDEDETPKMKKPEKPPQKKSIRGRHKKTKKPTRPKQRNPRKVASTKDKKTKKPTPESDSDFVSPPSSDHEYTISEEEREQMREARVYCANLRAKLRSSSSQNQEETQRKKYPIRKGKEKLEENTKDEIGKQVCGICLSEEAKRTVRGVLNCCRHYFCFSCIMEWSKVESRCPLCKQRFSTITKAAKSDTGFDSRTVVIPVPECDQVYEPSEEELRGYLDPYESVICTECHHGGEDALMLLCDICDSSAHTFCVGLGREVPEGNWYCDGCRPTVFGSLNSSDPLPPSSSRSPIPGGFDLNELYVPETPLTQQQPQSQQTRVLVLPEPGDFTPATTLRDRRRIHRQIHHRFLNNNRMNDLVNRNGGRTSSSSASGIRLFGSQLDQPQSQRDNHVGVGADVSLEGEHGGPGLGLGFDSRLGFGQLHPCTNRSSIASDACREVVGPSRTSQGGFHAPY